| 2023 | Computational insights into the binding of pimodivir to the mutated PB2 subunit of the influenza A virus
M Arba, AS Ningsih, LOS Bande, ST Wahyudi, C Bui-Linh, C Wu, A Karton
Molecular Simulation, 1-13 |
| 2023 | Characterization, protein modeling, and molecular docking of factor C from Indonesian horseshoe crab (Tachypleus gigas)
AZ Mustopa, AF Izaki, S Suharsono, F Fatimah, F Fauziyah, R Damarani, …
Journal of Genetic Engineering and Biotechnology 21 (1), 44 |
| 2023 | Virtual Screening of Natural Compounds Against Six Protein Receptors Coded by The SARS-CoV-2 Genome
F Awaluddin, I Batubara, ST Wahyudi
Molekul 18 (1), 147-158 |
| 2022 | Compounds in Indonesian Ginger Rhizome Extracts and Their Potential for Anti-Skin Aging Based on Molecular Docking
SF Asoka, I Batubara, AR Lestari, WT Wahyuni, ST Wahyudi
Cosmetics 9 (6), 128 |
| 2022 | A dynamical model of combination therapy applied to glioma
H Handoko, ST Wahyudi, AA Setyawan, A Kartono
Journal of Biological Physics 48 (4), 439-459 |
| 2022 | Gingerol and shogaol content of Zingiber officinale Var. Rubrum and its potency as anti acnes based on in silico study
ST Wahyudi, WT Wahyuni, SF Asoka, I Batubara
AIP Conference Proceedings 2553 (1), 020037 |
| 2022 | Potential Indonesian Natural Compound as antiviral for COVID-19 targeting the RdRp: In silico Study
ZS Muscifa, T Sumaryada, L Ambarsari, ST Wahyudi
Molekul 17 (3), 436-446 |
| 2022 | Enhancing Ionic Conductivity of Carboxymethyl Cellulose-Lithium Perchlorate with Crosslinked Citric Acid as Solid Polymer Electrolytes for Lithium Polymer Batteries.
A Maddu, AS Sulaeman, ST Wahyudi, A Rifai
International Journal of Renewable Energy Development 11 (4) |
| 2022 | Red ginger (Zingiber officinale var. rubrum): Its essential oil content and potential as an anti-propionibacterium acnes by molecular docking
SF Asoka, WT Wahyuni, I Batubara, ST Wahyudi
AIP Conference Proceedings 2563 (1), 050003 |
| 2022 | iVaccine-Deep: Prediction of COVID-19 mRNA vaccine degradation using deep learning
A Muneer, SM Fati, NA Akbar, D Agustriawan, ST Wahyudi
Journal of King Saud University-Computer and Information Sciences 34 (9 … |
| 2022 | Anti-inflammatory and Immunostimulant Therapy with Lactobacillus fermentum and Lactobacillus plantarum in COVID-19: A Literature Review
H Noviardi, D Iswantini, S Mulijani, ST Wahyudi, T Khusniati
Borneo Journal of Pharmacy 5 (3), 255-267 |
| 2022 | Effect of temperature variation on the structure of gene-translated thermostable lipase by molecular dynamic simulation
TM Iqbalsyah, RC Balqis, Febriani, ST Wahyudi
AIP Conference Proceedings 2638 (1), 040003 |
| 2022 | Computational study of kaurene diterpenoids for antivirals against SARS-CoV-2
N Nurlela, F Awaluddin, I Batubara, ST Wahyudi
Journal of Applied Pharmaceutical Science 12 (8), 112-129 |
| 2022 | Bioactive Compounds in Garlic (Allium sativum) and Black Garlic as Antigout Agents, Using Computer Simulation
AR Lestari, I Batubara, ST Wahyudi, A Ilmiawati, SS Achmadi
Life 12 (8), 1131 |
| 2022 | Unraveling the binding mechanism of the active form of Remdesivir to RdRp of SARS-CoV-2 and designing new potential analogues: Insights from molecular dynamics simulations
M Arba, N Paradis, ST Wahyudi, DJ Brunt, KR Hausman, PM Lakernick, …
Chemical Physics Letters 799, 139638 |
| 2022 | Binding of GS-461203 and Its Halogen Derivatives to HCV Genotype 2a RNA Polymerase Drug Resistance Mutants
M Arba, ST Wahyudi, MS Zubair, D Brunt, M Singh, C Wu
Scientia Pharmaceutica 90 (2), 26 |
| 2022 | Docking effects of curcuminoid ligands on protein L stability using molecular dynamics simulation with temperature variations
F Rahmatia, T Sumaryada, ST Wahyudi, H Hardhienata
AIP Conference Proceedings 2391 (1), 030002 |
| 2022 | Effects of Salt Concentration on the Water and Ion Self-Diffusion Coefficients of a Model Aqueous Sodium-Ion Battery Electrolyte
AW Sakti, ST Wahyudi, F Ahmad, N Darmawan, H Hardhienata, H Alatas
The Journal of Physical Chemistry B 126 (11), 2256-2264 |
| 2022 | Antioxidant Analysis of Kawa Daun (Coffea canephora) Beverage by In Vitro and In Silico Approaches
I Defri, NS Palupi, ST Wahyudi, ND Yuliana
Indonesian Journal of Chemistry |
| 2022 | Molecular dynamics analysis of glucose oxidase stability against temperature
L Ambarsari, FA Maulana, ST Wahyudi, PA Kurniatin, W Nurcholis
Biointerf Res Appl Chem 12 (3), 4062-4073 |
| 2022 | A New Method for Estimating Diagnostic Parameters in the Dynamics Model of Modified Glucose-Insulin Homeostasis from the Oral Glucose Tolerance Test Using a Gravitational …
A Kartono, IA Mafahir, ST Wahyudi, AA Setiawan, T Sumaryada
Arabian Journal for Science and Engineering, 1-13 |
| 2021 | Molecular Dynamics Simulation of Bioactive Compounds Against Six Protein Target of Sars-Cov-2 As Covid-19 Antivirus Candidates
F Awaluddin, I Batubara, ST Wahyudi
Jurnal Kimia Valensi 7 (2), 178-187 |
| 2021 | Forecasting the long-term trends of coronavirus disease 2019 (COVID-19) epidemic using the susceptible-infectious-recovered (SIR) model
A Kartono, SV Karimah, ST Wahyudi, AA Setiawan, I Sofian
Infectious Disease Reports 13 (3), 668-684 |
| 2021 | A Dynamic Model of Glioma Tumor Growth Based on Changes in Blood Glucose Concentration using Runge-Kutta Order 45
ST Wahyudi, AA Setiawan, A Kartono
Journal of Physics: Conference Series 1951 (1), 012062 |
| 2021 | Predicting of the coronavirus disease 2019 (COVID-19) epidemic using estimation of parameters in the logistic growth model
A Kartono, ST Wahyudi, AA Setiawan, I Sofian
Infectious Disease Reports 13 (2), 465-485 |
| 2021 | Study of Parameters Estimation of the Oral Glucose Tolerance Test Model with The Incretin Effects using Particle Swarm Optimization Algorithm
A Kartono, AA Restu, ST Wahyudi, AA Setiawan, T Sumaryada
Journal of Physics: Conference Series 1805 (1), 012031 |
| 2021 | Study of parameters estimation of the three-compartment pharmacokinetic model using particle swarm optimization algorithm
A Kartono, D Anggraini, ST Wahyudi, AA Setiawan
Journal of Physics: Conference Series 1805 (1), 012032 |
| 2021 | Cloning, heterologous expression, and characterization of a novel thioesterase from natural sample
G Mahardika, L Dewi, H Yohandini, MP Widhiastuty, RAW Sakti, …
Heliyon 7 (3), e06542 |
| 2021 | Mechanistic insight on the remdesivir binding to RNA-Dependent RNA polymerase (RdRp) of SARS-cov-2
M Arba, ST Wahyudi, DJ Brunt, N Paradis, C Wu
Computers in biology and medicine 129, 104156 |
| 2021 | Salt concentration effect on electrical and dielectric properties of solid polymer electrolytes based carboxymethyl cellulose for lithium-ion batteries
AS Sulaeman, A Maddu, ST Wahyudi, A Rifai
Biointerface Research in Applied Chemistry 12 (5), 6114-6123 |
| 2021 | In-Silico Design of Novel Glucagon-Like Peptide 1 Mutants as Candidate for New Peptide Agonist Drugs
T Sumaryada, AW Roslia, A Afifah, ST Wahyudi, A Kartono
HAYATI Journal of Biosciences 28 (1), 92-92 |
| 2021 | Structure Identification and Quality Assessment of Laccase (Lac InaCC) from Neurospora crassa by Using a Structure Prediction
R Kurniasih, L Ambarsari, ST Wahyudi
HAYATI Journal of Biosciences 28 (1), 1-1 |
| 2021 | A New Computer Simulation Study for The Nucleon–Core Interactions Using a Modified Woods–Saxon Potential and The Binary System Model
A Kartono, N Alfilail, ST Wahyudi, T Sumaryada
Arabian Journal for Science and Engineering 46 (1), 745-759 |
| 2020 | Predicting foreign currency exchange rates using the numerical solution of the incompressible Navier–Stokes equations
A Kartono, M Febriyanti, ST Wahyudi
Physica A: Statistical Mechanics and its Applications 560, 125191 |
| 2020 | Virtual screening of the Indonesian medicinal plant and zinc databases for potential inhibitors of the RNA-dependent RNA polymerase (RdRp) of 2019 novel coronavirus
M Arba, A Nur-Hidayat, I Usman, A Yanuar, ST Wahyudi, G Fleischer, …
Indonesian Journal of Chemistry 20 (6) |
| 2020 | Simulation of physical activities effect and treatment exogenous insulin for managing plasma glucose concentration in type 1 diabetes mellitus
A Kartono, M Sari, ST Wahyudi
Journal of Physics: Conference Series 1572 (1), 012060 |
| 2020 | Kinetics modeling studies of type 1 diabetes mellitus treatment with the function of exogenous glucose and insulin injection
A Kartono, DW Arjuna, ST Wahyudi
Journal of Physics: Conference Series 1572 (1), 012041 |
| 2020 | Phase characterization and electrical properties of fluorhydroxyapatite: influence of molarity variation and microwave irradiation
ZS Kubro, K Dahlan, ST Wahyudi
IOP Conference Series: Materials Science and Engineering 858 (1), 012011 |
| 2020 | Numerical solution of nonlinear Schrodinger approaches using the fourth-order Runge-Kutta method for predicting stock pricing
A Kartono, VW Fatmawati, ST Wahyudi
Journal of Physics: Conference Series 1491 (1), 012021 |
| 2020 | Application of the Thermodynamic System to Analyze the Relationship of the Money Amount Circulating Against Inflation
A Kartono, A Yufida, ST Wahyudi
Journal of Physics: Conference Series 1491 (1), 012016 |
| 2020 | Modified Glucose Absorption Equation in An Oral Minimal Model for Type 2 Diabetes Mellitus
A Kartono, HM Mufid, ST Wahyudi
Journal of Physics: Conference Series 1491 (1), 012023 |
| 2020 | An Interactive Simulation of the Nucleon-Core Interacting Using the Fourth-Order Runge-Kutta Method for Studying Nuclear Physics
A Kartono, ST Wahyudi
Journal of Physics: Conference Series 1491 (1), 012018 |
| 2020 | The Modified Oral Minimal Model to Know Incretin Hormone Effect in Type 2 Diabetes Mellitus
A Kartono, R Fadila, H Syafutra, ST Wahyudi, T Sumaryada |
| 2020 | Synthesis of calcium phosphate: influence of sintering temperature on the formation of fluorhydroxyapatite
ZS Kubro, ST Wahyudi, K Dahlan
International Journal of Nanoelectronics and Materials 13 (1), 8 |
| 2020 | Homology modeling and structural dynamics of the glucose oxidase
FA Maulana, L Ambarsari, ST Wahyudi
Indonesian Journal of Chemistry 20 (1), 43-53 |
| 2019 | Synthesis and characterization of nanoparticle magnetite for biomedical application
RK Wardani, K Dahlan, ST Wahyudi, SG Sukaryo
AIP Conference Proceedings 2194 (1), 020137 |
| 2019 | Structures prediction of Plasmodium Falciparum Signal Peptide Peptidase (PfSPP) and identification of binding Site
G Priambodo, A Kartono, I Batubara, ST Wahyudi
IOP Conference Series: Earth and Environmental Science 299 (1), 012007 |
| 2019 | PENUMBUHAN FILM CdO DENGAN METODE CHEMICAL BATH DEPOSITION (CBD)
A Maddu, JD Sirait, ST Wahyudi
Jurnal Sains Materi Indonesia 10 (1), 7-11 |
| 2019 | A mathematical model of the intravenous glucose tolerance test illustrating an n-order decay rate of plasma insulin in healthy and type 2 diabetic subjects
A Kartono, H Syafutra, ST Wahyudi, T Sumaryada
IOP Conference Series: Materials Science and Engineering 532 (1), 012016 |
| 2019 | Pharmacokinetics simulation of Metformin in type 2 Diabetes Mellitus
A Kartono, S Malik, H Syafutra, ST Wahyudi, T Sumaryada
Journal of Physics: Conference Series 1171 (1), 012044 |
| 2018 | Pharmacokinetic of Oral Drug Absorptionusing Modified Compartmental Absorption and Transit Modelin Small Intestine
A Kartono, RE Fitri, H Syafutra, ST Wahyudi, T Sumaryada
Journal of Physics: Conference Series 1120 (1), 012033 |
| 2018 | NANOSERAT POLIANILIN SEBAGAI CLADDING TERMODIFIKASI PADA SENSOR SERAT OPTIK UNTUK DETEKSI UAP ASETON
A Maddu, H Zain, A Aminuddin, ST Wahyudi
Jurnal Sains Materi Indonesia 9 (3), 220-225 |
| 2018 | Molecular modeling on porphyrin derivatives as β5 subunit inhibitor of 20S proteasome
M Arba, A Nur-Hidayat, M Yusuf, R Hertadi, ST Wahyudi, …
Computational Biology and Chemistry 74, 230-238 |
| 2018 | Investigating the effect of mutation on the thermo stability of GB1 protein
KN Sawitri, T Sumaryada, L Ambarsari, ST Wahyudi
Journal of Physics: Conference Series 1011 (1), 012084 |
| 2018 | The Role of E27-K31 and E56-K10 Salt-Bridge Pairs in the Unfolding Mechanism of the B1 Domain of Protein G
TI Sumaryada, KN Sawitri, ST Wahyudi
Indonesian Journal of Chemistry 18 (1), 186-193 |
| 2018 | Synthesis and Characterization of Hydroxyapatite-Collagen-Chitosan (HA/Col/Chi) Composite Coated on Ti6Al4V
A Bikharudin, ST Wahyudi
IOP Conference Series: Materials Science and Engineering 299 (1), 012028 |
| 2017 | Molecular modeling of cationic porphyrin-anthraquinone hybrids as DNA topoisomerase IIβ inhibitors
M Arba, S Ihsan, ST Wahyudi, DH Tjahjono
Computational biology and chemistry 71, 129-135 |
| 2017 | Optimization of insulin sensitivity and glucose effectiveness index from an oral glucose tolerance test using the modified oral minimal model and gravitational search algorithm
A Kartono, G Pratiwi, AA Setiawan, ST Wahyudi, T Sumaryada
Applied Mathematical Sciences 11 (9), 433-443 |
| 2016 | Cloning and sequence analysis of lipase gene from DMS3 isolate
MP Widhiastuty, ST Wahyudi, MR Moeis, F Madayanti
Biosciences Biotechnology Research Asia 9 (1), 187-192 |
| 2016 | Elucidation of GB1 Protein Unfolding Mechanism via a Long-timescale Molecular Dynamics Simulation
T Sumaryada, J Hati, ST Wahyudi, ND Malau, KN Sawitri
International Seminar on Science of Complex Natural Systems 31 |
| 2016 | Effects of Na Alginate in the Porosity of Scaffold Biphasic Calcium Phosphate/Alginate Composites
K Dahlan, NA Nuzulia, ST Wahyudi, S Utami
Key Engineering Materials 696, 183-186 |
| 2015 | RANCANG BANGUN SENSOR INERTIAL MEASUREMENT UNIT (IMU) UNTUK ROKET KENDALI LAPAN
ST WAHYUDI
Universitas Gadjah Mada |
| 2014 | Simple and easy method to synthesize chicken eggshell based hydroxyapatite
S Tri Wahyudi, S Utami Dewi, A Anggraeni, K Dahlan, Akhmaloka, …
Advanced materials research 896, 276-279 |
| 2012 | Sintesis Senyawa Kalsium Fosfat Dengan Teknik Presipitasi Single Drop
IP Ramadani
Jurnal Biofisika 8 (1) |
| 2010 | Sintesis Nanopartikel Zeolit Secara Top Down Menggunakan Planetary Ball Mill dan Ultrasonikator
S Wahyudi, D Amalia, S Rochani
Jurnal Ilmiah Jakarta: Pusat Penelitian dan Pengembangan Teknologi Mineral … |
| 2009 | Sintesis dan Karakterisasi Nanoserat Polianilin
A Maddu, ST Wahyudi, M Kurniati
Jurnal Nanosains & Nanoteknologi 1 (2), 74-78 |
| 2008 | Poly aniline Nano fiber as Modified Cladding for Optical Fiber Sensor to Detect Acetone Vapor; Nanoserat Polianilin Sebagai Cladding Termodifikasi Pada Sensor Serat Optik untuk …
ST Wahyudi, H Zain
Indonesian Journal of Materials Science 9 |
| 2008 | Poly aniline Nano fiber as Modified Cladding for Optical Fiber Sensor to Detect Acetone Vapor
TW Setyanto, Z Hamdani
Indonesian Journal of Materials Science 9 (3), 220-225 |
| | Molecular Dynamics Simulation of E412 Catalytic Residue Mutation of GOx-IPBCC
A Fanani, PA Kurniatin, ST Wahyudi, W Nurcholis, L Ambarsari
Journal of the Turkish Chemical Society Section A: Chemistry 9 (4), 1091-1106 |
| | Phenolic Compound in Garlic (Allium sativum) and Black Garlic Potency as Antigout Using Molecular Docking Approach
AR Lestari, I Batubara, ST Wahyudi, A Ilmiawati
Jurnal Kimia Sains dan Aplikasi 25 (7), 253-263 |
| | Potential Adenostemma lavenia and Muntingia calabura Extracts to Inhibit Cyclooxygenase-2 Activity as a Therapeutic Strategy for Anti-inflammation: Experimental and Theoretical …
B Tuwalaid, D Iswantini, ST Wahyudi
Indonesian Journal of Chemistry |
| | Computer and Information Sciences
A Muneer, SM Fati, NA Akbar, D Agustriawan, ST Wahyudi |
| | Sintesis scaffolds hidroksiapatit berpori berbasis Cangkang telur dan kitosan dengan metode sol gel
SU Dewi, ST Wahyudi, P Aulia, NA Nuzulia |
| | Simulasi Pembentangan Protein L Secara Mekanik Menggunakan Metode Steered Molecular Dynamics
TI Sumaryada, ST Wahyudi
Bogor Agricultral University (IPB) |
| | Energi Bebas Perolehan Tarikan Center of Mass (COM) pada Proses Fusi Membran Human Immunodeficiency Virus Type 1 (HIV-1)
ST Wahyudi
IPB University |
| | Analisis dinamika struktur mutan glukosa oksidase IPBCC dalam pengikatan substrat secara in silico
A Fanani, L Ambarsari, PA Kurniatin, ST Wahyudi
PROSIDING SEMINAR NASIONAL, 70 |
| | Screening Senyawa Aktif Berpotensi Anti Malaria pada Target PfTPI dengan Metode Komputasi Dinamika Molekul
ST Wahyudi, A Kartono
IPB University |
| | Simulasi Interaksi Nukleon Menggunakan Konsep Pusat Massa dan Potensial Woods-Saxon dengan Metode Runge Kutta Orde 4.
A Kartono, ST Wahyudi
IPB University |
